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SARS-CoV
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Description

The etiological agent of SARS is a novel coronavirus, and the virus is thus referred to as the SARS-coronavirus, abbreviated SARS-CoV. The name coronavirus derives from the halo/corona appearance of viral particles when viewed under a microscope, which is a result of the protruding spike proteins that coat the surface of the virus. The enveloped viral particle is 60-130 nm in diameter and contains a single-stranded positive RNA strand. The SARS-CoV genome is nucleotides in length with 41% being G/C residues. Large genome size is characteristic of coronaviruses, which actually exhibit the largest genomes of all RNA viruses.
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Significance in Biodefense Proteomics

Severe Acute Respiratory Syndrome (SARS) is the first severe and readily transmissible new disease to emerge in the 21st Century. Although much about SARS remains poorly understood, it is clear that this disease has major implications, both for public health and the global economy. SARS constitutes a particularly serious threat as there is no vaccine to date and no effective treatment, forcing health authorities to rely on traditional measures of isolation and quarantine. In addition, current diagnostic tests are limited in reliability, allowing potentially-infected patients to slip through the net of isolation and infection control. The products coming from studies of SARS will ultimately accelerate the development of therapeutics.

 

SEM of SARS-infected Vero E6 cells reveals the protrusion of "knobby", "rosettelike" viruses from the cells' edges

Atomic force micrograph reveals how uninfected Vero E6 cells looked relatively flat with minimal surface microbiology
from Public Health Image Library (PHIL)

     
pp1a pp1b
 
nsp1 nsp2 nsp3 nsp4 nsp5 nsp6 nsp7 nsp8 nsp9 nsp10 nsp11 nsp12 nsp13 nsp14 nsp15 nsp16  
leader p65 multi-
domain
3-TM 3CL-
Pro
7-TM 4-
Helix
Golf
Club
RNA
Binding
Zn-
finger
? RdRp Heli-
case
ExoN NendoU Methyl-
Transfer-
ase
 
 
    nsp3 (expanded)
    UB1 AC ADRP SUD N SUD C UB2 PLP2 RNABD UNK TM1 TM2 ZF TM3 TM4 Y
 
             
 
sars2 sars3a sars4 sars5 sars6 sars7a   sars8   sars9a              
  sars3b         sars7b     sars9b sars14            
Spike   E M 1-TM Ig-fold 1-TM   N lipid-
binding
             
                                 
  Replicate Proteins   Structural Proteins   Accessory Proteins   FSPS NMR Structure   FSPS Crystal Structure   Structures by Other Groups

View an in-depth summary of the SARS-CoV proteome.

*mouse slowly over column headers for more information

Organism PRC Data Type Pathogen
or Host
Data Sets
SOPs Master Protein Directory Pathogen Specific
Publications
Reagents Complete Predicted Proteome
SARS-CoV
Scripps Research Institute
Technology
Protein structure
5
11
-
5
-
6
17
Clone
-


Key to Catalog Links

Organism = view detailed information about the selected organism
PRC = view information about the Proteomics Research Centers
Pathogen or Host Data Sets = view data sets/experimental details for pathogen and host
SOPs = view or download related experiment Standard Operating Procedures

Master Protein Directory = view all identified pathogen and host proteins
Pathogen Specific Publications = view abstracts, manuscripts and/or publications
Reagents = request reagents by ID from BEI, PFGRC or PlasmID
Complete Predicted Proteome= view complete predicted proteomes


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